| Name | Side | Abbr. | Weight | Details |
|---|
| Dorsal raphe nucleus | contra | DR | 1.5 | |
| Dorsal raphe nucleus rostral part | contra | DRr | 3 | |
| Basolateral amygdaloid nucleus | contra | BL | -1 | |
| Septal region | contra | SER | 1 | |
| Periaqueductal gray | ipsi | PAG | 3 | |
| Superior colliculus | ipsi | SC | 0.5 | |
| Deep gray layer of the superior colliculus | ipsi | DpG | 1 | |
| Substantia nigra A9 | ipsi | SN | 1.5 | |
| Ventral tegmental area A10 | ipsi | VTA | -1 | |
| Laterodorsal tegmental nucleus | ipsi | LDTg | 1 | |
| Pedunculopontine tegmental nucleus | ipsi | PPTg | 1 | |
| Locus coeruleus | ipsi | LC | 1 | |
| Pontine reticular nucleus | ipsi | PRN | 1 | |
| Peribrachial region | ipsi | PBR | 1 | |
| Raphe nuclei | ipsi | RAN | 1 | |
| Dorsal raphe nucleus | ipsi | DR | 1.5 | |
| Dorsal raphe nucleus caudal part | ipsi | DRC | 3 | |
| Dorsal raphe nucleus midrostrocaudal part | ipsi | DRmrc | 3 | |
| Dorsal raphe nucleus rostral part | ipsi | DRr | 3 | |
| Endopiriform system | ipsi | EnN | 1 | |
| Nucleus of the horizontal limb of the diagonal band | ipsi | HDB | 1 | |
| Medial septal nucleus | ipsi | MS | 0.5 | |
| Lateral preoptic area | ipsi | LPO | 1 | |
| Medial preoptic area | ipsi | MPA | 1 | |
| Tenia tecta | ipsi | TT | 1 | |
| Lateral hypothalamic area [Region of tuber cinereum] | ipsi | LHTUC | 2 | |
| Lateral hypothalamic area | ipsi | LH | 2 | |
| Medial zone | ipsi | MHA | 0.5 | |
| Posterior hypothalamic area | ipsi | PHA | 1.5 | |
| Periventricular zone | ipsi | PVZ | 1.5 | |
| Mammillary body | ipsi | CMAM | 1 | |
| Mediodorsal thalamic nucleus | ipsi | MD | 3 | |
| Paratenial thalamic nucleus | ipsi | PT | 3 | |
| Paraventricular thalamic nucleus | ipsi | PV | 1.5 | |
| Reuniens thalamic nucleus | ipsi | Re | 2.5 | |
| Ventrolateral thalamic nucleus | ipsi | VL | 0 | |
| Ventromedial thalamic nucleus | ipsi | VM | 1 | |
| Intralaminar nuclei | ipsi | ILN | 1 | |
| Lateral posterior thalamic nucleus medial part | ipsi | LPM | 1 | |
| Laterodorsal thalamic nucleus | ipsi | LD | 1 | |
| Ventral thalamus | ipsi | VNT | 1.5 | |
| Reticular thalamic nucleus | ipsi | Rt | 1 | |
| Zona incerta | ipsi | ZI | 1 | |
| Lateral habenular nucleus medial part | ipsi | LHbM | 1 | |
| Basal nucleus | ipsi | Bnc | 1 | |
| Basolateral amygdaloid nucleus | ipsi | BL | -0.5 | |
| Anterior basolateral nucleus | ipsi | BLA | -0.5 | |
| Basolateral amygdaloid nucleus ventral part | ipsi | BLve | -0.5 | |
| Basolateral nucleus dorsomedial part | ipsi | BLdM | -0.5 | |
| Posterior basomedial nucleus | ipsi | BMP | -0.5 | |
| Lateral amygdaloid nucleus | ipsi | LA | 0.5 | |
| Bed nucleus of the stria terminalis lateral division | ipsi | BSTL | 1 | |
| Bed nucleus of the stria terminalis medial division | ipsi | BSTM | 0.5 | |
| Central amygdaloid nucleus | ipsi | Ce | 1 | |
| Sublenticular extended amygdala | ipsi | SLEA | 1 | |
| Cortical amygdaloid nucleus | ipsi | CAn | 0.5 | |
| Medial amygdaloid nucleus | ipsi | Me | 1 | |
| Claustrum | ipsi | Cl | 1.5 | |
| Ventral pallidum | ipsi | VP | 0.5 | |
| Accumbens nucleus core | ipsi | AcbC | 3 | |
| Medial core | ipsi | AcbCm | -0.5 | |
| Accumbens nucleus shell | ipsi | AcbSh | -3 | |
| Dorsomedial shell | ipsi | AcbShdm | -0.5 | |
| Dorsomedial shell of the accumbens nucleus lateral part | ipsi | AcbShdml | -1 | |
| Lateral accumbens shell | ipsi | AcbShl | -1 | |
| Medial accumbens shell | ipsi | AcbShm | 1.5 | |
| Ventromedial shell | ipsi | AcbShvm | -1 | |
| Caudal accumbens | ipsi | AcbCa | 1 | |
| Medial accumbens | ipsi | AcbM | 1 | |
| Ventromedial accumbens | ipsi | AcbVM | 1 | |
| Caudate putamen | ipsi | CPu | 2 | |
| Medial striatum | ipsi | CPum | -0.5 | |
| Ventral striatum | ipsi | CPuv | 1.5 | |
| Ventromedial striatum | ipsi | CPuvm | 2 | |
| Striatal cell bridges | ipsi | StrCB | -3 | |
| Subthalamic nucleus | ipsi | STh | 0.5 | |
| Hippocampus | ipsi | HIPP | 0 | |
| Ventral hippocampus | ipsi | HIPPv | 2 | |
| Presubiculum deep layers | ipsi | PrSDL | 1 | |
| Parasubiculum deep layers | ipsi | PaSDL | 1 | |
| Entorhinal cortex | ipsi | Ent | 0.5 | |
| Dorsal intermediate entorhinal cortex rostrocaudal extent deep layers | ipsi | DIEntRCedL | 2.5 | |
| Dorsolateral entorhinal cortex caudal portion | ipsi | DLEntc | -0.5 | |
| Medial entorhinal cortex caudal part | ipsi | MEntCa | -0.5 | |
| Ventral intermediate entorhinal cortex caudal part | ipsi | VIEntC | -0.5 | |
| Piriform cortex | ipsi | Pir | 1 | |
| Retrosplenial regions | ipsi | RS | 0.5 | |
| Cingulate cortex area 1 | ipsi | Cg1 | 1.5 | |
| Cingulate cortex area 1 caudal part | ipsi | Cg1c | 1 | |
| Cingulate cortex area 2 | ipsi | Cg2 | 1.5 | |
| Cingulate cortex area 2 caudal part | ipsi | Cg2c | 1 | |
| Prelimbic cortex dorsal part | ipsi | PrLd | 1 | |
| Prelimbic cortex ventral part | ipsi | PrLv | 3 | |
| Infralimbic cortex | ipsi | IL | 3 | |
| Frontal cortex area 2 | ipsi | Fr2 | 0.5 | |
| Temporal cortex | ipsi | TE | 0 | |
| Agranular insular cortex dorsal part | ipsi | AID | 1.5 | |
| Agranular insular cortex posterior part | ipsi | AIP | 1 | |
| Agranular insular cortex ventral part | ipsi | AIV | 1.5 | |
| Perirhinal cortex | ipsi | A35 | 0.5 | |
| Perirhinal cortex layers | ipsi | PRhL | 2 | |
| Perirhinal cortex inner layers | ipsi | PRhiL | 2 | |
| Primary somatosensory cortex | ipsi | S1 | 0.5 | |
| Primary visual cortex | ipsi | V1 | 0.5 | |
| Orbital cortex | ipsi | OrC | 0.5 | |
| Medial orbital cortex | ipsi | MO | 2.5 | |
| Nucleus of the posterior commissure | ipsi | PCom | -0.5 | |
| Interpeduncular nucleus | ipsi | IP | 0.5 | |
| Anterior olfactory nucleus | ipsi | AON | 1 | |
| Olfactory tubercle | ipsi | TuO | 0.5 | |
| Olfactory tubercle medial part | ipsi | TuOMP | 1 | |
| Septal region | ipsi | SER | 1.5 | |
| Lateral septal nucleus | ipsi | LS | 0.5 | |
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