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Rat connectome
Reuniens thalamic nucleus caudomedial division left
Abbreviation
Recm
Color
Superior regions
Nucleus reuniens caudal division
Synonyms
Abbr.
Language
Reuniens thalamic nucleus caudomedial division
Recm
Eng
RECm
Input from
Name
Side
Abbr.
Weight
Details
Central gray mesencephalic part
ipsi
CGM
2
Central gray pons part
ipsi
CGP
1
Superior colliculus
ipsi
SC
2
Substantia nigra compact part
ipsi
SNC
1
Ventral tegmental area A10
ipsi
VTA
2
Peripeduncular nucleus
ipsi
PP
1
Retrorubral nucleus
ipsi
RR
1
Laterodorsal tegmental nucleus
ipsi
LDTg
3
Pedunculopontine tegmental nucleus
ipsi
PPTg
3
Locus coeruleus
ipsi
LC
1
Nucleus incertus
ipsi
NI
1
Pons caudal part
ipsi
Pca
1
Pons oral part
ipsi
Por
1
Reticulotegmental nucleus
ipsi
RETn
1
Magnocellular reticular nucleus
ipsi
NRMC
1
Mesencephalic reticular formation
ipsi
MRF
1
Cuneiforme nucleus
ipsi
CnF
2
Parabrachial nucleus
ipsi
PB
2
Koelliker Fuse nucleus
ipsi
KF
1
Gigantocellular reticular nucleus
ipsi
Gi
1
Supragenual nucleus
ipsi
SGe
2
Nucleus of the solitary tract
ipsi
Sol
1
Nucleus of the solitary tract commissural part
ipsi
SolC
3
Dorsal raphe nucleus
ipsi
DR
2
Median raphe nucleus
ipsi
MnR
2
Central raphe nucleus
ipsi
CRN
1
Raphe magnus nucleus
ipsi
RMg
1
Diagonal band of Broca
ipsi
DBB
1
Medial septal nucleus
ipsi
MS
1
Substantia innominata
ipsi
SI
1
Lateral preoptic area
ipsi
LPO
1
Medial preoptic area
ipsi
MPA
1
Anterodorsal preoptic nucleus
ipsi
ADP
1
Magnocellular preoptic nucleus
ipsi
MCPO
2
Medial preoptic nucleus
ipsi
MPO
2
Dorsal tenia tecta
ipsi
DTT
2
Tuberomammillary nucleus
ipsi
TuM
1
Lateral hypothalamic area
ipsi
LH
2
Anterior hypothalamic area
ipsi
AHA
2
Anterior hypothalamic nucleus
ipsi
AHn
2
Anteroventral preoptic nucleus
ipsi
AnV
1
Dorsomedial hypothalamic nucleus [Medial zone]
ipsi
DM
1
Posterior hypothalamic area
ipsi
PHA
2
Ventromedial hypothalamic nucleus
ipsi
VMH
2
Paraventricular hypothalamic nucleus
ipsi
Pa
1
Lateral mammillary nucleus
ipsi
LM
2
Medial mammillary nucleus
ipsi
MMn
1
Premammillary nucleus dorsal part
ipsi
PMD
2
Premammillary nucleus ventral part
ipsi
PMV
1
Subfornical organ
ipsi
SFO
2
Reticular thalamic nucleus
ipsi
Rt
3
Zona incerta
ipsi
ZI
3
Lateral habenular nucleus
ipsi
LHb
2
Anterior pretectal nucleus
ipsi
APT
2
Medial pretectal nucleus
ipsi
MPT
3
Posterior pretectal nucleus
ipsi
PPT
2
Basomedial amygdaloid nucleus
ipsi
BM
1
Bed nucleus of the stria terminalis
ipsi
BST
1
Central amygdaloid nucleus
ipsi
Ce
1
Cortical amygdaloid nucleus
ipsi
CAn
1
Medial amygdaloid nucleus
ipsi
Me
1
Claustrum
ipsi
Cl
3
Ammon horn
ipsi
AmH
1
Subiculum dorsal part
ipsi
Sd
2
Subiculum ventral part
ipsi
Sv
2
Presubiculum
ipsi
PrS
2
Postsubiculum
ipsi
Post
2
Retrosplenial agranular cortex
ipsi
RSA
2
Retrosplenial granular cortex subdivisions
ipsi
RSGsu
2
Cingulate cortex area 1
ipsi
Cg1
2
Cingulate cortex area 1 caudal part
ipsi
Cg1c
3
Cingulate cortex area 2
ipsi
Cg2
2
Cingulate cortex area 2 caudal part
ipsi
Cg2c
3
Prelimbic cortex
ipsi
PrL
3
Infralimbic cortex
ipsi
IL
3
Parietal association cortex
ipsi
PtA
2
Agranular insular cortex dorsal part
ipsi
AID
3
Agranular insular cortex posterior part
ipsi
AIP
2
Agranular insular cortex ventral part
ipsi
AIV
2
Perirhinal cortex
ipsi
A35
3
Ectorhinal cortex
ipsi
A36
2
Medial agranular prefrontal cortex
ipsi
AGm
3
Primary somatosensory cortex
ipsi
S1
2
Secondary somatosensory cortex
ipsi
S2
2
Visual regions
ipsi
VR
2
Medial orbital cortex
ipsi
MO
3
Precommissural nucleus
ipsi
PrC
2
Intergeniculate leaf
ipsi
IGL
2
Ventral lateral geniculate nucleus
ipsi
VLG
2
Interpeduncular nucleus
ipsi
IP
2
Lateral septal nucleus
ipsi
LS
1
Septofimbrial nucleus
ipsi
SFi
1
Dorsomedial hypothalamic nucleus [Medial zone]
contra
DM
1
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
Homepage
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Staff
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neuroVIISAS
|
Rat connectome
|
Other connectomes
|
Neuroimaging
|
Neurodegeneration
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Students
|
Links
|
Publications