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Rat connectome



Spinal cord layer 8 C6 right


Abbreviation
SCL8C6
Color       
Superior regionsIntermediate zone C6

SynonymsAbbr.Language
Spinal cord layer 8 C6SCL8C6Eng

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschcontraDk-0.5
Oculomotor nucleuscontra3-0.5
Dorsal periaqueductal graycontraDPAG1
Dorsolateral periaqueductal graycontraDLPAG3
Lateral periaqueductal graycontraLPAG3
Ventrolateral periaqueductal graycontraVLPAG2
Intercollicular nucleuscontraInCo-0.5
Superior colliculuscontraSC-0.5
Superior colliculus intermediate layerscontraSCi-0.5
Superior colliculus deep layerscontraSCd-0.5
Edinger Westphal nucleuscontraEW-0.5
Interstitial nucleus of CajalcontraInC-0.5
Anterior lobecontraAnL3
Cerebellar lobule 4contraCERL41.5
Cerebellar lobule 5contraCERL51.5
Cerebellar lobule 7contraCERL71.5
Cerebellar lobule 7acontraCERL7a1.5
Cerebellar lobule 7bcontraCERL7b1.5
Cerebellar lobule 8contraCERL81.5
Cerebellar lobule 9contraCERL91.5
Cerebellar lobule 6contraCERL61.5
Cerebellar lobule 6acontraCERL6a1.5
Cerebellar lobule 6bcontraCERL6b1.5
Cerebellar lobule 6ccontraCERL6c1.5
Cerebellar lobule 6dcontraCERL6d1.5
Pontine reticular nucleus oral partcontraPnO3
Cuneiforme nucleuscontraCnF2
Parabrachial nucleuscontraPB2
Lateral parabrachial nucleus lateral partcontraLPBL1
Parabrachial nucleus central lateral partcontraPBCeL1
Parabrachial nucleus dorsolateral partcontraPBDL1
Parabrachial nucleus superior lateralcontraPBSL1
Gigantocellular reticular nucleuscontraGi3
Gigantocellular reticular nucleus lateral partcontraGirL3
Lateral reticular nucleuscontraLRt3
Caudal part to the midportion of the lateral reticular nucleuscontraCaLRtMp0.5
Caudomedial part of the lateral reticular nucleuscontraLRtcm-0.5
Caudal third of the caudomedial part of the lateral reticular nucleuscontraLRtcmCt0.5
Lateral reticular nucleus lateral partcontraLRtL0.5
Lateral reticular nucleus rostral partcontraLRtr2
Subnucleus reticularis dorsaliscontraSRD1
Subnucleus reticularis ventralis medullae oblongataecontraSRV-0.5
Spinal vestibular nucleuscontraSpVe-0.5
Vestibular nucleicontraVnc3
Raphe pallidus nucleuscontraRPa1
Inferior olive dorsal nucleuscontraIOD3
Paragigantocellular reticular nucleuscontraPGi3
Lateral paragigantocellular nucleuscontraLPGi-0.5
Paragigantocellular reticular nucleus medial partcontraPGiM-0.5
HypothalamuscontraHYPO3
Centrolateral thalamic nucleuscontraCL3
Lateral group of the dorsal thalamuscontraLAT1.5
Ventrobasal complexcontraVB3
Ventral posterolateral thalamic nucleuscontraVPL-0.5
Ventral posteromedial thalamic nucleuscontraVPM-0.5
Posterior groupcontraPTG3
Pretectal regioncontraPRT-0.5
Lateral funiculuscontralf-2
Cervical segment 1contraCS11.5
Cervical segment 2contraCS21.5
Cervical segment 3contraCS31.5
Cervical segment 4contraCS41.5
Cervical segment 5contraCS51.5
Cervical segment 6contraCS61.5
Cervical segment 7contraCS71.5
Spinal cord layer 9 C7contraSCL9C7-0.5
Cervical segment 8contraCS81.5
Thoracal segment 1contraT11.5
Thoracal segment 2contraT21.5
Spinal cord layers T2contraSCLT23
Thoracal segment 3contraT31.5
Thoracal segment 4contraT41.5
Thoracal segment 5contraT51.5
Thoracal segment 6contraT61.5
Thoracal segment 7contraT71.5
Thoracal segment 8contraT81.5
Thoracal segment 9contraT91.5
Thoracal segment 10contraT101.5
Thoracal segment 11contraT111.5
Thoracal segment 12contraT121.5
Thoracal segment 13contraT131.5
Lumbar segmentscontraLSeg3
Lumbar segment 1contraL11.5
Spinal cord layer 9 L1contraSCL9L12
Lumbar segment 2contraL21.5
Spinal cord layer 9 L2contraSCL9L22
Lumbar segment 3contraL31.5
Spinal cord layer 9 L3contraSCL9L32
Lumbar segment 4contraL41.5
Area X L4contraSCL10L41
Spinal cord layer 8 L4contraSCL8L41
Lumbar segment 5contraL51.5
Lumbar segment 6contraL61.5
Sacral segment 1contraSa11.5
Sacral segment 2contraSa21.5
Sacral segment 3contraSa31.5
Sacral segment 4contraSa41.5
Coccygeal segment 1contraCo1-0.5
Coccygeal segment 2contraCo2-0.5
Dorsal periaqueductal grayipsiDPAG0.5
Dorsolateral periaqueductal grayipsiDLPAG1
Lateral periaqueductal grayipsiLPAG1
Ventrolateral periaqueductal grayipsiVLPAG1.5
Posterior lobe of the cerebellumipsiCERCPL1
Anterior lobeipsiAnL3
Cerebellar lobule 4ipsiCERL41
Cerebellar lobule 5ipsiCERL51
Cerebellar lobule 7ipsiCERL71
Cerebellar lobule 7aipsiCERL7a1
Cerebellar lobule 7bipsiCERL7b1
Cerebellar lobule 8ipsiCERL81
Cerebellar lobule 9ipsiCERL91
Cerebellar lobule 6ipsiCERL61
Cerebellar lobule 6aipsiCERL6a1
Cerebellar lobule 6bipsiCERL6b1
Cerebellar lobule 6cipsiCERL6c1
Cerebellar lobule 6dipsiCERL6d1
Reticular systemipsiRF-0.5
Magnocellular reticular nucleusipsiNRMC-0.5
Medial pontomedullary reticular formationipsiMPomRF-0.5
Pontine reticular nucleusipsiPRN-0.5
Pontine reticular nucleus oral partipsiPnO1
Cuneiforme nucleusipsiCnF1.5
Parabrachial nucleusipsiPB1.5
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleus crescent partipsiLPBCr0.5
Lateral parabrachial nucleus dorsolateral partipsiLPBdL0.5
Lateral parabrachial nucleus external part inner portionipsiLPBEip0.5
Lateral parabrachial nucleus external part outer portionipsiLPBEop0
Lateral parabrachial nucleus internal partipsiLPBI1.5
Lateral parabrachial nucleus lateral partipsiLPBL1
Lateral parabrachial nucleus superior partipsiLPBS0.5
Parabrachial nucleus central lateral partipsiPBCeL0
Parabrachial nucleus dorsolateral partipsiPBDL0
Parabrachial nucleus medialipsiPBnMe0
Medial parabrachial nucleus external partipsiMPBE0.5
Parabrachial nucleus superior lateralipsiPBSL0
Gigantocellular reticular nucleusipsiGi1
Lateral reticular nucleusipsiLRt1
Medullary reticular nucleusipsiMdD-0.5
Subnucleus reticularis dorsalisipsiSRD3
Subnucleus reticularis ventralis medullae oblongataeipsiSRV-0.5
Medullary reticular nucleus dorsal partipsiMdDd-0.5
Spinal vestibular nucleusipsiSpVe-0.5
Vestibular nucleiipsiVnc1
Nucleus of the solitary tractipsiSol1
Raphe pallidus nucleusipsiRPa1
Cuneate nucleusipsiCu1
Inferior olive dorsal nucleusipsiIOD1
Paragigantocellular reticular nucleusipsiPGi1
Lateral paragigantocellular nucleusipsiLPGi-0.5
Paragigantocellular reticular nucleus medial partipsiPGiM-0.5
HypothalamusipsiHYPO1
Lateral hypothalamic areaipsiLH-0.5
Posterior hypothalamic areaipsiPHA-0.5
Centrolateral thalamic nucleusipsiCL1
Ventrobasal complexipsiVB1
Ventral posterolateral thalamic nucleusipsiVPL-0.5
Ventral posteromedial thalamic nucleusipsiVPM-0.5
Posterior groupipsiPTG1
Cuneate fasciculusipsicu-2
Central amygdaloid nucleus anterior partipsiCeAn-0.5
Cervical segment 1ipsiCS13
Interneuron groups of layer 9 C8ipsiiGL9C8-0.5
Cervical segment 2ipsiCS22
Cervical segment 3ipsiCS32
Cervical segment 4ipsiCS42
Interneuron groups of layer 9 C4ipsiiGL9C4-0.5
Motoneuron groups of layer 9 C4ipsiMGL9C4-0.5
Cervical segment 5ipsiCS52
Motoneuron groups of layer 9 C5ipsiMGL9C5-0.5
Cervical segment 6ipsiCS62
Interneuron groups of layer 9 C5ipsiiGL9C5-0.5
Motoneuron groups of layer 9 C6ipsiMGL9C6-0.5
Cervical segment 7ipsiCS72
Interneuron groups of layer 9 C6ipsiiGL9C6-0.5
Motoneuron groups of layer 9 C7ipsiMGL9C7-0.5
Spinal cord layer 9 C7ipsiSCL9C7-0.5
Cervical segment 8ipsiCS82
Interneuron groups of layer 9 C7ipsiiGL9C7-0.5
Motoneuron groups of layer 9 C8ipsiMGL9C8-0.5
Thoracal segment 1ipsiT12
Thoracal segment 2ipsiT23
Spinal cord layers T2ipsiSCLT22
Thoracal segment 3ipsiT32
Thoracal segment 4ipsiT42
Thoracal segment 5ipsiT52
Thoracal segment 6ipsiT62
Thoracal segment 7ipsiT72
Thoracal segment 8ipsiT82
Thoracal segment 9ipsiT92
Thoracal segment 10ipsiT102
Thoracal segment 11ipsiT112
Thoracal segment 12ipsiT122
Thoracal segment 13ipsiT132
Lumbar segmentsipsiLSeg3
Lumbar segment 1ipsiL12
Spinal cord layer 5 L1ipsiSCL5L1-0.5
Spinal cord layer 4 L1ipsiSCL4L1-0.5
Spinal cord layer 7 L1ipsiSCL7L1-0.5
Spinal cord layer 8 L1ipsiSCL8L1-0.5
Spinal cord layer 9 L1ipsiSCL9L13
Lumbar segment 2ipsiL22
Spinal cord layer 5 L2ipsiSCL5L2-0.5
Spinal cord layer 4 L2ipsiSCL4L2-0.5
Spinal cord layer 7 L2ipsiSCL7L2-0.5
Spinal cord layer 8 L2ipsiSCL8L2-0.5
Spinal cord layer 9 L2ipsiSCL9L23
Lumbar segment 3ipsiL32
Spinal cord layer 5 L3ipsiSCL5L3-0.5
Spinal cord layer 4 L3ipsiSCL4L3-0.5
Spinal cord layer 7 L3ipsiSCL7L3-0.5
Spinal cord layer 8 L3ipsiSCL8L3-0.5
Spinal cord layer 9 L3ipsiSCL9L33
Lumbar segment 4ipsiL42
Area X L4ipsiSCL10L41
Spinal cord layer 5 L4ipsiSCL5L4-0.5
Spinal cord layer 4 L4ipsiSCL4L4-0.5
Spinal cord layer 7 L4ipsiSCL7L4-0.5
Spinal cord layer 8 L4ipsiSCL8L41
Lumbar segment 5ipsiL52
Spinal cord layer 5 L5ipsiSCL5L5-0.5
Spinal cord layer 4 L5ipsiSCL4L5-0.5
Spinal cord layer 7 L5ipsiSCL7L5-0.5
Spinal cord layer 8 L5ipsiSCL8L5-0.5
Lumbar segment 6ipsiL62
Spinal cord layer 5 L6ipsiSCL5L6-0.5
Spinal cord layer 4 L6ipsiSCL4L6-0.5
Spinal cord layer 7 L6ipsiSCL7L6-0.5
Spinal cord layer 8 L6ipsiSCL8L6-0.5
Sacral segment 1ipsiSa12
Spinal cord layer 5 S1ipsiSCL5S1-0.5
Spinal cord layer 4 S1ipsiSCL4S1-0.5
Spinal cord layer 7 S1ipsiSCL7S1-0.5
Spinal cord layer 8 S1ipsiSCL8S1-0.5
Sacral segment 2ipsiSa22
Spinal cord layer 5 S2ipsiSCL5S2-0.5
Spinal cord layer 4 S2ipsiSCL4S2-0.5
Spinal cord layer 7 S2ipsiSCL7S2-0.5
Spinal cord layer 8 S2ipsiSCL8S2-0.5
Sacral segment 3ipsiSa32
Spinal cord layer 5 S3ipsiSCL5S3-0.5
Spinal cord layer 4 S3ipsiSCL4S3-0.5
Spinal cord layer 7 S3ipsiSCL7S3-0.5
Spinal cord layer 8 S3ipsiSCL8S3-0.5
Sacral segment 4ipsiSa42
Spinal cord layer 5 S4ipsiSCL5S4-0.5
Spinal cord layer 4 S4ipsiSCL4S4-0.5
Spinal cord layer 7 S4ipsiSCL7S4-0.5
Spinal cord layer 8 S4ipsiSCL8S4-0.5
Coccygeal segment 1ipsiCo1-0.5
Coccygeal segment 2ipsiCo2-0.5
Median nervecontramen-0.5
Ulnar nervecontrauln-0.5
Ulnar nerveipsiuln-0.5
Bulbospongiosus muscleipsiMuscbsp1

Input from

NameSideAbbr.WeightDetails
Superior colliculus intermediate layerscontraSCi-0.5
Intermediate gray layer of the superior colliculuscontraInG-0.5
Superior colliculus deep layerscontraSCd-0.5
Locus coeruleuscontraLC2
Caudal part of ventral locus coeruleuscontraLCveca0.5
Magnocellular reticular nucleuscontraNRMC-0.5
Medial reticular formationcontraRFm-0.5
Mesencephalic reticular formationcontraMRF-0.5
Pontine reticular nucleus oral partcontraPnO0.5
Pontine reticular nucleus caudal partcontraPNC1
Gigantocellular reticular nucleuscontraGi1
Gigantocellular reticular nucleus medial partcontraGiM-0.5
Dorsal part of spinal trigeminal nucleus oral partcontraSp5OD-0.5
Ventral part of spinal trigeminal nucleus oral partcontraSp5OV-0.5
Spinal vestibular nucleuscontraSpVe-0.5
Medial vestibular nucleuscontraMVe-0.5
Forelimb motor cortexcontraFMCx3
Primary somatosensory cortexcontraS11
Spinal cord layer 7 T10contraSCL7T103
Spinal cord layer 8 T10contraSCL8T103
Spinal cord layer 7 T11contraSCL7T113
Spinal cord layer 8 T11contraSCL8T113
Spinal cord layer 7 T12contraSCL7T123
Spinal cord layer 8 T12contraSCL8T123
Spinal cord layer 7 T13contraSCL7T133
Spinal cord layer 8 T13contraSCL8T133
Lumbar segment 1contraL1-0.5
Spinal cord layer 7 L1contraSCL7L13
Spinal cord layer 8 L1contraSCL8L13
Lumbar segment 2contraL2-0.5
Spinal cord layer 7 L2contraSCL7L23
Spinal cord layer 8 L2contraSCL8L23
Lumbar segment 3contraL3-0.5
Spinal cord layer 7 L3contraSCL7L33
Spinal cord layer 8 L3contraSCL8L33
Lumbar segment 4contraL4-0.5
Spinal cord layer 7 L4contraSCL7L43
Spinal cord layer 8 L4contraSCL8L43
Lumbar segment 5contraL5-0.5
Spinal cord layer 7 L5contraSCL7L53
Spinal cord layer 8 L5contraSCL8L53
Lumbar segment 6contraL6-0.5
Spinal cord layer 7 L6contraSCL7L63
Spinal cord layer 8 L6contraSCL8L63
Spinal cord layer 7 S1contraSCL7S13
Spinal cord layer 8 S1contraSCL8S13
Spinal cord layer 7 S2contraSCL7S23
Spinal cord layer 8 S2contraSCL8S23
Central grayipsiCG1
Red nucleusipsiR2.5
Red nucleus caudal partipsiRnCa3
Red nucleus rostral partipsiRnRo3
Ventrolateral tegmental areaipsiVLTg2
Laterodorsal tegmental nucleusipsiLDTg-0.5
Interstitial nucleus of CajalipsiInC1.5
A5 noradrenaline cellsipsiA52
Locus coeruleusipsiLC3
Caudal part of ventral locus coeruleusipsiLCveca3
Reticular systemipsiRF-0.5
Magnocellular reticular nucleusipsiNRMC-0.5
Medial reticular formationipsiRFm-0.5
Ventral reticular formationipsiVRF2
Ventrolateral reticular formationipsiVLRF-0.5
Mesencephalic reticular formationipsiMRF-0.5
Pontine reticular nucleusipsiPRN3
Dorsolateral pontine reticular formationipsiPRNDL1
Pontine reticular nucleus oral partipsiPnO1
Pontine reticular nucleus caudal partipsiPNC3
Koelliker Fuse nucleusipsiKF2
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe1
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus medial partipsiGiM-0.5
Gigantocellular reticular nucleus rostral partipsiGiRo-0.5
Medial subnucleus reticularis ventralisipsiMSRV-0.5
Subcoeruleus nucleusipsiSubC3
Boetzinger complexipsiBo0
Dorsal part of spinal trigeminal nucleus oral partipsiSp5OD-0.5
Ventral part of spinal trigeminal nucleus oral partipsiSp5OV-0.5
Spinal vestibular nucleusipsiSpVe-0.5
Medial vestibular nucleusipsiMVe-0.5
Lateral vestibular nucleusipsiLVe-0.5
Raphe magnus nucleusipsiRMg3
Raphe pallidus nucleusipsiRPa3
Rostral part of the ventromedial medulla oblongataipsiRMeObvm1
Lateral hypothalamic areaipsiLH1
Paraventricular hypothalamic nucleusipsiPa0.5
Zona incerta rostromedial partipsiZIrm0
Lateral agranular prefrontal cortexipsiAGl1
Medial agranular prefrontal cortexipsiAGm1
Primary somatosensory cortexipsiS11
Secondary somatosensory cortexipsiS21
Area X T1ipsiSCL10T1-0.5
Spinal cord layer 5 T1ipsiSCL5T1-0.5
Spinal cord layer 6 T1ipsiSCL6T1-0.5
Spinal cord layer 3 T1ipsiSCL3T1-0.5
Spinal cord layer 4 T1ipsiSCL4T1-0.5
Spinal cord layer 1 T1ipsiSCL1T1-0.5
Spinal cord layer 2 T1ipsiSCL2T1-0.5
Spinal cord layer 7 T1ipsiSCL7T1-0.5
Spinal cord layer 8 T1ipsiSCL8T1-0.5
Area X T2ipsiSCL10T2-0.5
Spinal cord layer 5 T2ipsiSCL5T2-0.5
Spinal cord layer 6 T2ipsiSCL6T2-0.5
Spinal cord layer 3 T2ipsiSCL3T2-0.5
Spinal cord layer 4 T2ipsiSCL4T2-0.5
Spinal cord layer 1 T2ipsiSCL1T2-0.5
Spinal cord layer 2 T2ipsiSCL2T2-0.5
Spinal cord layer 7 T2ipsiSCL7T2-0.5
Spinal cord layer 8 T2ipsiSCL8T2-0.5
Area X T3ipsiSCL10T3-0.5
Spinal cord layer 5 T3ipsiSCL5T3-0.5
Spinal cord layer 6 T3ipsiSCL6T3-0.5
Spinal cord layer 3 T3ipsiSCL3T3-0.5
Spinal cord layer 4 T3ipsiSCL4T3-0.5
Spinal cord layer 1 T3ipsiSCL1T3-0.5
Spinal cord layer 2 T3ipsiSCL2T3-0.5
Spinal cord layer 7 T3ipsiSCL7T3-0.5
Spinal cord layer 8 T3ipsiSCL8T3-0.5
Spinal cord layer 7 T10ipsiSCL7T103
Spinal cord layer 8 T10ipsiSCL8T103
Spinal cord layer 7 T11ipsiSCL7T113
Spinal cord layer 8 T11ipsiSCL8T113
Spinal cord layer 7 T12ipsiSCL7T123
Spinal cord layer 8 T12ipsiSCL8T123
Spinal cord layer 7 T13ipsiSCL7T133
Spinal cord layer 8 T13ipsiSCL8T133
Lumbar segment 1ipsiL1-0.5
Spinal cord layer 7 L1ipsiSCL7L13
Spinal cord layer 8 L1ipsiSCL8L13
Lumbar segment 2ipsiL2-0.5
Spinal cord layer 7 L2ipsiSCL7L23
Spinal cord layer 8 L2ipsiSCL8L23
Lumbar segment 3ipsiL3-0.5
Spinal cord layer 7 L3ipsiSCL7L33
Spinal cord layer 8 L3ipsiSCL8L33
Lumbar segment 4ipsiL4-0.5
Spinal cord layer 7 L4ipsiSCL7L43
Spinal cord layer 8 L4ipsiSCL8L43
Lumbar segment 5ipsiL5-0.5
Spinal cord layer 7 L5ipsiSCL7L53
Spinal cord layer 8 L5ipsiSCL8L53
Lumbar segment 6ipsiL6-0.5
Spinal cord layer 7 L6ipsiSCL7L63
Spinal cord layer 8 L6ipsiSCL8L63
Spinal cord layer 7 S1ipsiSCL7S13
Spinal cord layer 8 S1ipsiSCL8S13
Spinal cord layer 7 S2ipsiSCL7S23
Spinal cord layer 8 S2ipsiSCL8S23

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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