University of Rostock

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Rat connectome



Lateral prefrontal cortex left


Abbreviation
lPFC
Color       
Superior regionsMotoric regions

SynonymsAbbr.Language
Lateral frontal cortex  
Lateral prefrontal cortexlPFCEng
Lateral frontal region Eng

SubregionsSide
Lateral agranular prefrontal cortexleft
Rostral sensory motor areasleft
Lateral prefrontal cortex layersleft

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk3
Medial accessory oculomotor nucleusipsiMA3-0.5
Ventrolateral periaqueductal grayipsiVLPAG3
Ventral midbrain tegmentumipsiVeMT3
Substantia nigra reticular partipsiSNR-1
Substantia nigra A9 dorsomedial partipsiSNDM3
Dorsolateral portion of the midbrainipsiMECDL3
Reticular systemipsiRF3
Dorsal reticular formationipsiDRF-0.5
Cuneiforme nucleusipsiCnF3
Parabrachial nucleusipsiPB-1
Lateral parabrachial nucleusipsiLPB-0.5
Parabrachial nucleus medialipsiPBnMe-0.5
Area postremaipsiAP-0.5
Hypoglossal nucleusipsi12S-0.5
Dorsomedial spinal trigeminal nucleusipsiDMSp50.5
Spinal trigeminal nucleusipsiSp5nc1
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract lateral partipsiSolL2
Nucleus of the solitary tract medial partipsiSolM-0.5
Nucleus of the solitary tract medial part dorsal division lateral portionipsiSolMDL1.5
Nucleus of the solitary tract midrostral partipsiSolmr2
Dorsal motor nucleus of vagusipsi100.5
Cuneate nucleusipsiCu-0.5
Internal subpostremal zoneipsiISubP1.5
Basal nucleus MeynertipsiB3
Tuberomammillary nucleusipsiTuM0.5
Posterior region [Lateral division of the hypothalamus]ipsiPReg3
Tuberal region of lateral hypothalamusipsiTuLH3
Posterolateral hypothalamusipsiPLHY3
Posterolateral hypothalamus dorsal to subthalamic nucleusipsiPLHYdsth3
Posterolateral hypothalamus medial to subthalamic nucleusipsiPLHYmsth1
A13 dopamine cellsipsiA13-0.5
ThalamusipsiT3
Mediodorsal thalamic nucleusipsiMD-0.5
Mediodorsal thalamic nucleus medial partipsiMDM3
Ventrolateral thalamic nucleusipsiVL-2
Ventrobasal complexipsiVB1.5
External medullary laminaipsieml-2
Lateral posterior thalamic nucleus mediocaudal partipsiLPMC3
Ventral thalamusipsiVNT3
Reticular thalamic nucleusipsiRt3
Lateral aspect of the ventral thalamic nucleusipsiVNTL3
Zona incertaipsiZI3
Nucleus of the fields of ForelipsiF0.5
Internal capsuleipsiic-2
Cerebral peduncle basal partipsicp-2
Basolateral amygdaloid nucleusipsiBL3
Basolateral nucleus medial portionipsiBLmp0.5
Lateral amygdaloid nucleusipsiLA0.5
Central amygdaloid nucleusipsiCe0.5
ClaustrumipsiCl-1
Accumbens nucleusipsiAc1
Accumbens nucleus coreipsiAcbC-0.5
Lateral coreipsiAcbCl-0.5
Lateral accumbens shellipsiAcbShl-0.5
Accumbens nucleus ventral regionsipsiAcV-0.5
Caudate putamenipsiCPu-2
Dorsomedial striatumipsiCPudm0
Dorsolateral striatumipsiCPudl2
Ventral striatumipsiCPuv-0.5
Ventrolateral striatumipsiCPuvl2
Lateral striatumipsiCPul-1
Fundus of the striatumipsiFS2
Striatal cell bridgesipsiStrCB-0.5
Subthalamic nucleus dorsal partipsiSThd-2
Subthalamic nucleus ventral partipsiSThv-2
Lateral prefrontal cortexipsilPFC-1
Interpeduncular nucleusipsiIP3
Olfactory tubercleipsiTuO-0.5
Dorsal reticular formationcontraDRF-0.5
Lateral parabrachial nucleuscontraLPB-0.5
Parabrachial nucleus medialcontraPBnMe-0.5
Area postremacontraAP-0.5
Hypoglossal nucleuscontra12S-0.5
Nucleus of the solitary tractcontraSol-0.5
Nucleus of the solitary tract lateral partcontraSolL-0.5
Nucleus of the solitary tract medial partcontraSolM-0.5
Dorsal motor nucleus of vaguscontra10-0.5
Cuneate nucleuscontraCu-0.5
Basal nucleus MeynertcontraB0.5
Tuberomammillary nucleuscontraTuM0.5
Posterior region [Lateral division of the hypothalamus]contraPReg0.5
Tuberal region of lateral hypothalamuscontraTuLH0.5
Parafascicular thalamic nucleuscontraPF2
Mediodorsal thalamic nucleus medial partcontraMDM-0.5
Nucleus of the fields of ForelcontraF0
Dorsomedial striatumcontraCPudm0
Dorsolateral striatumcontraCPudl2
Ventrolateral striatumcontraCPuvl1
Agranular insular cortex posterior partcontraAIP3
Granular insular cortex posterior partcontraGIpo3
Lateral prefrontal cortexcontralPFC-0.5
Medial prefrontal cortexcontramPFC-0.5

Input from

NameSideAbbr.WeightDetails
Substantia nigra A9 dorsolateral partipsiSNdL0
Substantia nigra compact part lateral tieripsiSNCL0.5
Ventral tegmental area A10ipsiVTA0.5
Ventral tegmental area A10 dorsolateral partipsiVTAdL0
Laterodorsal tegmental nucleusipsiLDTg2
Dorsal tegmental nucleusipsiDTg1
Locus coeruleusipsiLC1
Parabrachial nucleusipsiPB1
Dorsal raphe nucleusipsiDR3
Ventral endopiriform nucleusipsiVEn3
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Basal nucleus MeynertipsiB2
Substantia innominataipsiSI-0.5
Lateral hypothalamic areaipsiLH-0.5
Central medial thalamic nucleusipsiCM-1
Centrolateral thalamic nucleus dorsal partipsiCLD1
Paracentral thalamic nucleusipsiPC-1
Mediodorsal thalamic nucleusipsiMD-0.5
Intermediodorsal thalamic nucleusipsiIMD3
Mediodorsal thalamic nucleus medial partipsiMDM0.5
Zona incertaipsiZI1
Amygdaloid complexipsiAC0
Basolateral amygdaloid nucleusipsiBL3
Anterior basolateral nucleusipsiBLA3
Anterior basolateral nucleus caudomedial partipsiBLAcm3
Anterior basolateral nucleus dorsomedial partipsiBLADM1.5
Anterior basolateral nucleus rostral partipsiBLARo3
Rostral pole of the anterior basolateral amygdaloid nucleusipsiBLAR4
Basolateral nucleus lateral partipsiBLLP2
Basolateral nucleus medial portionipsiBLmp2
Basolateral nucleus medial portion anterior partipsiBLmpa3
Posterior basolateral nucleusipsiBLP-1
Posterior basolateral nucleus lateral partipsiBLPLP3
Lateral two thirds of the posterior subdivision of the basolateral nucleusipsiBLPLtt3
Posterior basolateral nucleus medial partipsiBLPMP3
Posterior basolateral nucleus rostral partipsiBLPRP3
Ventral basolateral nucleusipsiBLV-0.5
Basomedial amygdaloid nucleusipsiBM-1
Basomedial amygdaloid nucleus rostral partipsiBMr-0.5
Basomedial nucleus magnocellular division rostral partipsiABmcrp2
Lateral amygdaloid nucleusipsiLA1
Lateral nucleus rostral three fourthipsiLARrtf3
Central amygdaloid nucleusipsiCe0
Amygdalopiriform transition areaipsiAPir-0.5
Nucleus of the lateral olfactory tractipsiLOT-1
Nucleus of the lateral olfactory tract layer 3ipsiLOTL31
Periamygdaloid cortex layer 1ipsiPACL1-0.5
Periamygdaloid cortex layer 2ipsiPACL2-1
Medial amygdaloid nucleusipsiMe0
Medial part of claustrumipsiMCl1
Globus pallidusipsiGP-0.5
Ventral pallidumipsiVP-0.5
HippocampusipsiHIPP-0.5
Hippocampal temporalipsiHIPPt-0.5
Hippocampus intermediate partipsiHIPPip-0.5
Ventrally in the intermediate part of the hippocampusLipsiHIPPipve-0.5
Dorsally in the intermediate part of the hippocampusipsiHIPPipdo0
Field CA1 of hippocampus layer stratum radiatumipsiCA1rad0.5
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Field CA1 of hippocampus layer stratum oriensipsiCA1or0.5
Field CA1 of hippocampus intermediate partipsiCA1im-0.5
Field CA2 of hippocampus layer stratum radiatumipsiCA2rad0.5
Field CA2 of hippocampus layer stratum pyramidaleipsiCA2pyr-0.5
Field CA2 of hippocampus layer stratum oriensipsiCA2or0.5
Subiculum stratum radiatumipsiSurad0.5
Subiculum layer 5ipsiSuL50.5
Most caudal part of entorhinal cortexipsiEntmC-0.5
Agranular insular cortex dorsal partipsiAID2
Agranular insular cortex dorsal part rostrocaudal partipsiAIDRC3
Agranular insular cortex posterior partipsiAIP-0.5
Agranular insular cortex ventral partipsiAIV2
Perirhinal cortexipsiA35-0.5
Perirhinal cortex layer 4ipsiA35L43
Perirhinal cortex layer 5ipsiA35L53
Perirhinal cortex layer 6ipsiA35L63
Lateral prefrontal cortexipsilPFC-1
Dorsally adjacent rostral precentral areaipsiDarAGm3
Ventral endopiriform nucleuscontraVEn-0.5
Anterior basolateral nucleus caudomedial partcontraBLAcm1
Anterior basolateral nucleus ventral partcontraBLAVP-0.5
Rostral pole of the anterior basolateral amygdaloid nucleuscontraBLAR1
Basolateral nucleus medial portion anterior partcontraBLmpa-0.5
Ventral basolateral nucleus rostral portioncontraBLVr1
Nucleus of the lateral olfactory tractcontraLOT-0.5
Agranular insular cortex posterior partcontraAIP-0.5
Perirhinal cortex ventral portioncontraPRhv-0.5
Lateral prefrontal cortexcontralPFC-0.5
Medial prefrontal cortexcontramPFC-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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