| Name | Side | Abbr. | Weight | Details |
|---|
| Mesencephalon | ipsi | MEC | -0.5 | |
| Central gray | ipsi | CG | 2.5 | |
| Central gray mesencephalic part ventromedial part | ipsi | CGMvm | 2.5 | |
| Periaqueductal gray | ipsi | PAG | 2.5 | |
| Ventrolateral periaqueductal gray | ipsi | VLPAG | 1 | |
| Lateral pontine tegmentum | ipsi | LPTG | -0.5 | |
| Laterodorsal tegmental nucleus | ipsi | LDTg | -0.5 | |
| Laterodorsal tegmental nucleus medial half | ipsi | LDTgmh | 2.5 | |
| Ventral tegmental nucleus | ipsi | VTg | 0.5 | |
| Ventral tegmental nucleus central part | ipsi | VTgC | -0.5 | |
| Dorsal tegmental nucleus | ipsi | DTg | 2.5 | |
| Dorsal tegmental nucleus caudal part | ipsi | DTgCa | 2.5 | |
| Dorsal tegmental nucleus dorsal part | ipsi | DTgD | 0.5 | |
| Pons | ipsi | P | -0.5 | |
| Lateral pontine nucleus | ipsi | LPn | -0.5 | |
| Nucleus incertus | ipsi | NI | -0.5 | |
| Nucleus incertus pars compacta | ipsi | NIc | 2 | |
| Nucleus incertus pars dissipata | ipsi | NId | 1 | |
| Ventral pontine nucleus caudalis | ipsi | VBPNc | -0.5 | |
| Medial reticular formation | ipsi | RFm | 2 | |
| Pontine reticular nucleus | ipsi | PRN | 1 | |
| Dorsal raphe nucleus | ipsi | DR | -0.5 | |
| Dorsal raphe nucleus caudal part | ipsi | DRC | 1 | |
| Median raphe nucleus | ipsi | MnR | 2.5 | |
| Superior central raphe nucleus | ipsi | CS | 0 | |
| Median raphe nucleus rostrocaudal extent | ipsi | MnRrc | 2.5 | |
| Paramedian raphe nucleus | ipsi | PMnR | 0 | |
| Diagonal band of Broca | ipsi | DBB | 1 | |
| Nucleus of the horizontal limb of the diagonal band | ipsi | HDB | 2.5 | |
| Nucleus of the vertical limb of the diagonal band | ipsi | VDB | 1 | |
| Medial septal nucleus | ipsi | MS | 1 | |
| Lateral preoptic area | ipsi | LPO | 2 | |
| Lateral preoptic lateral hypothalamic continuum | ipsi | LPOLH | 2.5 | |
| Magnocellular preoptic nucleus | ipsi | MCPO | -0.5 | |
| Hypothalamus | ipsi | HYPO | -0.5 | |
| Lateral hypothalamic area | ipsi | LH | 3 | |
| Lateral hypothalamic area perifornical part | ipsi | PFx | 3 | |
| Dorsomedial hypothalamic nucleus [Medial zone] | ipsi | DM | 3 | |
| Dorsomedial hypothalamic nucleus dorsomedial part | ipsi | DMDM | 3 | |
| Posterior hypothalamic area | ipsi | PHA | 3 | |
| Mammillothalamic tract | ipsi | mt | 1 | |
| Supramammillar nucleus | ipsi | SuM | 1 | |
| Lateral habenular nucleus | ipsi | LHb | 2.5 | |
| Medial habenular nucleus | ipsi | MHb | 3 | |
| Medial habenular nucleus dorsal part | ipsi | MHbd | 3 | |
| Medial habenular nucleus dorsolateral part | ipsi | MHbDL | 3 | |
| Medial habenular nucleus lateral part | ipsi | MHbL | 3 | |
| Medial habenular nucleus ventral part | ipsi | MHbv | -0.5 | |
| Medial habenular nucleus ventrolateral part | ipsi | MHbVL | 3 | |
| Medial lemniscus | ipsi | ml | -0.5 | |
| Ventromedial margin of the nucleus accumbens | ipsi | AcbVMm | 1 | |
| Retrosplenial agranular cortex | ipsi | RSA | -0.5 | |
| Anterior cingulate cortex | ipsi | ACC | -0.5 | |
| Prelimbic cortex | ipsi | PrL | -0.5 | |
| Prelimbic cortex rostral part | ipsi | PrLr | -0.5 | |
| Intergeniculate leaf rostrocaudal part | ipsi | IGLR | -0.5 | |
| Ventral lateral geniculate nucleus | ipsi | VLG | 1 | |
| Septal region | ipsi | SER | -0.5 | |
| Central gray | contra | CG | 2.5 | |
| Central gray mesencephalic part ventromedial part | contra | CGMvm | 2.5 | |
| Periaqueductal gray | contra | PAG | 1 | |
| Ventrolateral periaqueductal gray | contra | VLPAG | 1 | |
| Laterodorsal tegmental nucleus | contra | LDTg | -0.5 | |
| Laterodorsal tegmental nucleus medial half | contra | LDTgmh | 2.5 | |
| Dorsal tegmental nucleus | contra | DTg | 2.5 | |
| Dorsal tegmental nucleus caudal part | contra | DTgCa | 2.5 | |
| Dorsal tegmental nucleus dorsal part | contra | DTgD | 0.5 | |
| Nucleus incertus | contra | NI | 0.5 | |
| Dorsal raphe nucleus caudal part | contra | DRC | 1 | |
| Nucleus of the horizontal limb of the diagonal band | contra | HDB | 0.5 | |
| Lateral preoptic lateral hypothalamic continuum | contra | LPOLH | 1 | |
| Lateral hypothalamic area | contra | LH | 1 | |
| Lateral habenular nucleus | contra | LHb | 2.5 | |
| Medial habenular nucleus | contra | MHb | 2.5 | |
| Medial habenular nucleus dorsal part | contra | MHbd | -0.5 | |
| Medial habenular nucleus lateral part | contra | MHbL | 2.5 | |
| Medial habenular nucleus ventrolateral part | contra | MHbVL | 2 | |
| Ventromedial margin of the nucleus accumbens | contra | AcbVMm | -0.5 | |
| Prelimbic cortex rostral part | contra | PrLr | -0.5 | |
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