University of Rostock

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Rat connectome



Incerto hypothalamic area left


Abbreviation
icHYPO
Color       
Superior regionsHypothalamus

SynonymsAbbr.Language
Incerto hypothalamic areaicHYPOEng
Incerto hypothalamic area Eng

SubregionsSide
Incerto hypothalamic area lateral partleft
Incerto hypothalamic area mediocaudal partleft
Incerto hypothalamic area rostral partleft

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk-0.5
Peduncularpontine nucleusipsiPPN2
Ventral tegmental area A10ipsiVTA1
Caudal linear nucleus of the rapheipsiCLi1
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleusipsiDTg1
Edinger Westphal nucleusipsiEW-0.5
PonsipsiP-0.5
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC1
Nucleus incertusipsiNI1
Pontine reticular nucleusipsiPRN-0.5
Cuneiforme nucleusipsiCnF2
Gigantocellular reticular nucleusipsiGi1
Dorsal raphe nucleusipsiDR3
Rostral linear nucleus of the rapheipsiRLi1
Median raphe nucleusipsiMnR1
Paramedian raphe nucleusipsiPMnR-0.5
Pontine raphe nucleusipsiPnR-0.5
Raphe magnus nucleusipsiRMg-0.5
Median eminenceipsiME1
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Medial septal nucleusipsiMS1
Lateral preoptic areaipsiLPO1
Medial preoptic areaipsiMPA2
Ventrolateral preoptic nucleusipsiVLPO2
Ventromedial preoptic nucleusipsiVMPO1
Dorsal tuberomammillary nucleusipsiDTM1
Ventral tuberomammillary nucleusipsiVTM1
Vascular organ of the lamina terminalisipsiVOLT1
Preoptic medial regionipsiPMeR-2
Lateral hypothalamic area perifornical partipsiPFx-0.5
Anterior hypothalamic areaipsiAHA-2
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe2
Dorsal hypothalamic areaipsiDA2
Posterior hypothalamic areaipsiPHA3
Posterior hypothalamic nucleusipsiPH3
Tuberal areaipsiTA1
Area between ventromedial and dorsomedial hypothalamic nucleusipsiAbVMHaDMH2
Nucleus paraventricularis magnocellular partipsiPaMa-0.5
Paraventricular hypothalamic nucleusipsiPa-2
Periventricular hypothalamic nucleusipsiPe1
Supraoptic nucleus [Supraoptic region]ipsiSO2
Lateral mammillary nucleusipsiLM1
Medial mammillary nucleusipsiMMn1
Premammillary nucleus dorsal partipsiPMD1
Supramammillar nucleusipsiSuM1
Anteromedial thalamic nucleusipsiAM1
Interanteromedial thalamic nucleusipsiAiM1
Central medial thalamic nucleusipsiCM1
Paracentral thalamic nucleusipsiPC1
Rhomboid thalamic nucleusipsiRh1
Mediodorsal thalamic nucleusipsiMD-0.5
Intermediodorsal thalamic nucleusipsiIMD-0.5
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleusipsiPV1
Paraventricular thalamic nucleus posterior partipsiPVP-0.5
Reuniens thalamic nucleusipsiRe3
Reticular thalamic nucleus prosomere 1ipsip1RT-0.5
Zona incerta medial partipsiZIm-0.5
Bed nucleus of the stria terminalis medial divisionipsiBSTM-0.5
Central amygdaloid nucleusipsiCe1
Medial amygdaloid nucleusipsiMe1
Medial accumbens shellipsiAcbShm-0.5
Field CA1 of hippocampusipsiCA11
Subiculum ventral partipsiSv0.5
PresubiculumipsiPrS1
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL1
Precommissural nucleusipsiPrC3
Precommissural nucleus posterior partipsiPrCP-0.5
Ventral lateral geniculate nucleusipsiVLG-0.5
Lateral septal nucleusipsiLS1
Lateral septal nucleus intermediate partipsiLSI-0.5
Lateral septal nucleus rostrodorsal partipsiLSrd-0.5
Lateral septal nucleus rostroventral partipsiLSrv-0.5
Spinal cord lamina 10ipsiMESL101
Central gray pons partcontraCGP1
Periaqueductal graycontraPAG1
Cuneiforme nucleuscontraCnF1
Tuberomammillary nucleuscontraTuM1
Anterior hypothalamic areacontraAHA-0.5
Posterior hypothalamic nucleuscontraPH1
Incerto hypothalamic areacontraicHYPO-0.5
Supramammillar nucleuscontraSuM1
Bed nucleus of the stria terminaliscontraBST-0.5
Precommissural nucleuscontraPrC1
Septal regioncontraSER-0.5

Input from

NameSideAbbr.WeightDetails
Medial preoptic areaipsiMPA1
Incerto hypothalamic areacontraicHYPO-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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